Karolina Mikulska home page
Karolina Mikulska home page

Linki do ważniejszych stron:

Instytut Fizyki UMK
Zespół teoretycznej Biofizyki Molekularnej (TMBG, Theoretical Molecular Biophysics Group)
Polskie Towarzystwo Bioinformatyczne (PTBI)
Koło naukowe SPIE (International Society of Optical Engineering)
Bioinformatics in Torun (BIT)

 
 


Różne bardzo przydatne linki do serwerów bioinformatycznych:


  1. PDB - Protein Data Bank
  2. NCBI - National Center for Biotechnology Information
  3. BLAST - The Basic Local Alignment Search Tool
  4. HHpred - Homology detection & structure prediction by HMM-HMM comparison
  5. Expasy - ExPASy Proteomics Server
  6. UniProt - Protein Knowledgebase
  7. NPSA - Network Protein Sequence Analysis
  8. GeneSilico - Laboratory of Bioinformatics and Protein Engineering
  9. SwissParam
  10. NCBI - MapViewer
  11. LALIGN - find multiple matching subsegments in two sequences
  12. ConFunc - Conserved residue Protein Function Prediction Server
  13. ProFunc - Prediction of protein function from 3D structure
  14. PubChem
  15. ZINC - A free database for virtual screening
  16. ChemSpider - The free chemical database
  17. STRING - Known and Predicted Protein-Protein Interactions
  18. ModBase - Database of Comparative Protein Structure Models
  19. Phyre
  20. elNémo
  21. GetArea
  22. SAVES - Stuctural Analysis and Verification Server
  23. ProSA-web - Protein Structure Analysis
  24. BSE - Basis set Echange
  25. PatentLens
  26. GeneCards
  27. BSDB
  28. MMTSB - Go model
  29. DSSP Analysis
  30. Pro-origami - rysunki 2D struktury 3D
  31. PROSA
  32. FFAS - Fold & Function Assignment
  33. PDB2PQR
  34. STRIDE

 


Darmowe oprogramowanie:


  1. NAMD - Scalable Molecular Dynamics
  2. VMD - Molecular Graphics Viewer
  3. GROMACS
  4. MAESTRO (Schrodinger) - cześć darmowa
  5. DeepView - Swiss-PdbViewer
  6. AutoDock
  7. VEGA ZZ
  8. CHIMERA
  9. ArgusLab - Molecular Modeling and Drug Docking Software
  10. JalView
  11. Clustal - Multiple Sequence Alignment
  12. BABEL - konwerter plików
  13. MOLDEN - A pre- and post processing program of molecular and electronic structure
  14. ChemSketch
  15. PyMol
  16. Hollow
  17. CARMA
  18. EUCB
  19. Gabedit



Inne:

  1. MOLNET


 
Slideshow by phatfusion
Design by Next Level Design Lizenztyp CC